You simply do:
Code:
read_fasta -i contigs.fna | grab -e "SEQ_LEN>=200" | analyze_assembly -x
Code:
N50: 9082 MAX: 52038 MIN: 200 MEAN: 4170 TOTAL: 3057214 COUNT: 733 ---
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read_fasta -i contigs.fna | grab -e "SEQ_LEN>=200" | analyze_assembly -x
N50: 9082 MAX: 52038 MIN: 200 MEAN: 4170 TOTAL: 3057214 COUNT: 733 ---
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