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  • Beginner

    Hi all
    I am new to this forum, and of course new to NGS. I have to carry out DNA methylation profiling by MeDIP-Seq (SOLiD). I am almost ignorant about how to analyze the data after sequencing. If someone can suggest me a "beginner's guide" type of article, it would be really helpful. I have some articles but they all are a little advanced and I can not comprehend most of the content in them.

    Umer

  • #2
    Do you know basic UNIX commands? If not, do a tutorial such as this:
    http://www.ee.surrey.ac.uk/Teaching/Unix/

    Then you have to pick the software you want to use. A good resource is the SEQanswers Wiki.
    http://seqanswers.com/wiki/SEQanswers

    Where you will find entries like this:
    http://td-blade.gurdon.cam.ac.uk/software/batman/
    --------------
    Ethan

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