I'm putting together a pipeline to automate the process of analysing ERCC spike-in RNA controls in an RNAseq experiment. Just wondering if anyone is aware of publically available test datasets that could be used for this?
e.g. an Illumina / Ion torrent /454 RNAseq run where the ERCC controls have been added?
EDIT: answered my own question: just go to the SRA and search for "ERCC".
Curious if anyone has established pipelines to automate analysis of ERCC controls?
e.g. an Illumina / Ion torrent /454 RNAseq run where the ERCC controls have been added?
EDIT: answered my own question: just go to the SRA and search for "ERCC".
Curious if anyone has established pipelines to automate analysis of ERCC controls?