Hello, I need a software for me to use to detect splice sites on genes to find introns on genes.
I find a website http://genes.mit.edu/GENSCAN.html
which is for vertebrate, and maize.
I am working with plants. the website above does not seem to work well with my organism. or I did not setup the correct parameter for it to work
what is Suboptimal exon cutoff? what number shall i set up to?
any suggestions? many thanks
I find a website http://genes.mit.edu/GENSCAN.html
which is for vertebrate, and maize.
I am working with plants. the website above does not seem to work well with my organism. or I did not setup the correct parameter for it to work
what is Suboptimal exon cutoff? what number shall i set up to?
any suggestions? many thanks