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  • #61
    So what is the update with this project https://github.com/nh13/samtools . Is it still faster than multi-threaded version of samtools ? Is this going to be a good substitute for Goby and Cram ?

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    • #62
      Has there been any success on mpileup speedup ? Is the parallelization by pthreads or MPI ?

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      • #63
        Is the bcftools that come with samtools also multithreaded ?

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        • #64
          Originally posted by narain View Post
          So what is the update with this project https://github.com/nh13/samtools . Is it still faster than multi-threaded version of samtools ? Is this going to be a good substitute for Goby and Cram ?
          There was no desire from the folks maintaining samtools to take over the development and add it. Sorry for the delayed response.

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