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  • moriah
    started a topic csfasta + qual to fastq

    csfasta + qual to fastq

    Hi all,

    I am trying to convert solid csfasta + qual files to fastq. I tried using the solid2fastq (version 1.1.4) and seems accept the input just fine (no errors) but it creates no output.

    I was wondering what can I do in such case? What might be the problem?

    The commans is :
    perl ~/Desktop/solid2fastq.pl solid0162_20110314_bcSample1_F3.csfasta solid0162_20110314_bcSample1_F3.qual > out.fastq

    Is there any other script I could use to do the same?

    Thanks,
    Moriah

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