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promoter sequence analysis

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  • promoter sequence analysis

    I have about 100 promoter/5'UTR sequences. I would like to find out if any special motifs or TF biding sites among them. They are from Sorghum.

    What would be a good tool or website for my purpose?

  • #2
    Originally posted by shuang View Post
    I have about 100 promoter/5'UTR sequences. I would like to find out if any special motifs or TF biding sites among them. They are from Sorghum.

    What would be a good tool or website for my purpose?
    What about MEME? http://meme.sdsc.edu/meme/intro.html

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