I have multiple exome sequences from a 5500 platform that I would like to compare. Basically what I am trying to do is to find genes that are commonly mutated in these individuals.
I got ANNOVAR to annotate all the data but trying to combine all the exomes and do a tele count is a bit cumbersome.
Would anybody please advise on how to tackle this?
I got ANNOVAR to annotate all the data but trying to combine all the exomes and do a tele count is a bit cumbersome.
Would anybody please advise on how to tackle this?