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  • #1

    Identification of Transcription factor using Matrix

    Hi,
    I have a list of SNPs for which I would like to identified sites for transcription factor binding (using sequence around). I would like to use known motifs (for ex from TRANSFAC database) as well new matrix that are not included in public database. I have many different samples to analyse. Please could you help me to figure out what would be the best way/tools to do that?
    I am very new in this domain ...
    Thanks a lot all for your help
    Tags: None
  • #2
    You could use the tool described here:
    Nothing found for Meme Fimo Intro
    http://meme.nbcr.net/meme/fimo-intro.html

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