Seqanswers Leaderboard Ad

Collapse

Announcement

Collapse
No announcement yet.
X
 
  • Filter
  • Time
  • Show
Clear All
new posts

  • what tools could plot a picture like this

    Dear everyone,

    I want to know how this kind picture is plotted, could you help me? Just mark the target regions on each chromosome.

    thank you.
    Attached Files

  • #2
    It is most likely plotted by PERL GD module. R, gnuplot, python mathplotlib also can do it.

    Comment


    • #3
      You could make something pretty similar in seqmonk. The genome view window can plot out sets of positions and export them as SVG.

      This screenshot shows something similar, but not exactly the same.

      Comment


      • #4
        get it, thank you.

        Originally posted by BENM View Post
        It is most likely plotted by PERL GD module. R, gnuplot, python mathplotlib also can do it.
        get it, thank you.

        Comment


        • #5
          this tool is very good, thank you very much.

          Originally posted by simonandrews View Post
          You could make something pretty similar in seqmonk. The genome view window can plot out sets of positions and export them as SVG.

          This screenshot shows something similar, but not exactly the same.
          this tool is very good, thank you very much.

          Comment

          Latest Articles

          Collapse

          • seqadmin
            Current Approaches to Protein Sequencing
            by seqadmin


            Proteins are often described as the workhorses of the cell, and identifying their sequences is key to understanding their role in biological processes and disease. Currently, the most common technique used to determine protein sequences is mass spectrometry. While still a valuable tool, mass spectrometry faces several limitations and requires a highly experienced scientist familiar with the equipment to operate it. Additionally, other proteomic methods, like affinity assays, are constrained...
            04-04-2024, 04:25 PM
          • seqadmin
            Strategies for Sequencing Challenging Samples
            by seqadmin


            Despite advancements in sequencing platforms and related sample preparation technologies, certain sample types continue to present significant challenges that can compromise sequencing results. Pedro Echave, Senior Manager of the Global Business Segment at Revvity, explained that the success of a sequencing experiment ultimately depends on the amount and integrity of the nucleic acid template (RNA or DNA) obtained from a sample. “The better the quality of the nucleic acid isolated...
            03-22-2024, 06:39 AM

          ad_right_rmr

          Collapse

          News

          Collapse

          Topics Statistics Last Post
          Started by seqadmin, 04-11-2024, 12:08 PM
          0 responses
          12 views
          0 likes
          Last Post seqadmin  
          Started by seqadmin, 04-10-2024, 10:19 PM
          0 responses
          17 views
          0 likes
          Last Post seqadmin  
          Started by seqadmin, 04-10-2024, 09:21 AM
          0 responses
          14 views
          0 likes
          Last Post seqadmin  
          Started by seqadmin, 04-04-2024, 09:00 AM
          0 responses
          43 views
          0 likes
          Last Post seqadmin  
          Working...
          X