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CummerBund error scale plots
Dear all,
I am quite new to bioinformatics and R enviroment. Nevertheless Im trying my best to analyse data from RNA seq. I ve done everything to get CummerBund funcioning and that went not smooth but it is working good now
However when I want to plot the data I get the following error:
fpkmSCVPlot(genes(cuff))
Scale for 'x' is already present. Adding another scale for 'x', which will replace the existing scale.
Error in seq.default(from = best$lmin, to = best$lmax, by = best$lstep) :
'from' must be of length 1
In addition: Warning message:
In max(log10(dat$fpkm)) : no non-missing arguments to max; returning -Inf
Can please please please someone help me to understand what this is?
Much appreciated,
xxx
I am quite new to bioinformatics and R enviroment. Nevertheless Im trying my best to analyse data from RNA seq. I ve done everything to get CummerBund funcioning and that went not smooth but it is working good now
However when I want to plot the data I get the following error:
fpkmSCVPlot(genes(cuff))
Scale for 'x' is already present. Adding another scale for 'x', which will replace the existing scale.
Error in seq.default(from = best$lmin, to = best$lmax, by = best$lstep) :
'from' must be of length 1
In addition: Warning message:
In max(log10(dat$fpkm)) : no non-missing arguments to max; returning -Inf
Can please please please someone help me to understand what this is?
Much appreciated,
xxx
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