How are K-mers used to form contigs in de novo assembly?

You are currently viewing the SEQanswers forums as a guest, which limits your access. Click here to register now, and join the discussion

kdarbs

Member

Join Date: May 2013

Posts: 10
- Share
- Tweet
#1

How are K-mers used to form contigs in de novo assembly?

09-26-2013, 03:32 PM

Hi,

I would like to know how the k-mers used to draw de bruijn graphs are assembled to form contigs.

Any ideas???

Thank you.
Tags: None
GenoMax

Senior Member

Join Date: Feb 2008

Posts: 7140
- Share
- Tweet
#2

09-26-2013, 05:02 PM

Check this thread for some articles on this topic: http://seqanswers.com/forums/showthread.php?t=31346
Comment
kdarbs

Member

Join Date: May 2013

Posts: 10
- Share
- Tweet
#3

09-26-2013, 05:11 PM

Thank you!
Comment

Previous template Next

Topics	Statistics	Last Post
Faster and Safer T-Cell Therapy: A Novel Approach by seqadmin Started by seqadmin, 11-27-2023, 08:12 AM	0 responses 15 views 0 likes	Last Post by seqadmin 11-27-2023, 08:12 AM
Stem Cell Transplantation: A New Approach to Avoid Immune Rejection by seqadmin Started by seqadmin, 11-22-2023, 09:29 AM	1 response 53 views 0 likes	Last Post by VilliamPast 11-25-2023, 02:47 AM
A New Era in Single-Cell Analysis: Transcriptome and Proteome Profiling by seqadmin Started by seqadmin, 11-22-2023, 08:53 AM	0 responses 64 views 0 likes	Last Post by seqadmin 11-22-2023, 08:53 AM
Enhancing Plant Breeding with Advanced Software by seqadmin Started by seqadmin, 11-21-2023, 08:24 AM	0 responses 32 views 0 likes	Last Post by seqadmin 11-21-2023, 08:24 AM

Working...

Announcement