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  • How to annotate 13 nts sequence

    I did smallRNA sequencing and detected 3 types of sequences that where 13, 14 and 15 nts long. In total they had about 30 mill reads.
    When I run blast I get too many hits to make any sense. How do I go along to annotate these 3 sequences?

    Regards

  • #2
    You might try checking out miRBase: http://www.mirbase.org/

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