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  • plink --window and --from-kb and --to-kb difference

    Hi,
    Is there a difference between the plink --window and --from-kb --to-kb options?
    Thanks

  • #2
    The PLINK website gives the explanations below:




    --snp {SNP} Select this SNP ...
    --window {kb} ... and (optionally) all SNPs in the surrounding kb window


    --from-kb {kb} Select SNPs within this window...
    --to-kb {kb} ... specified in kilobases

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