I use pennCNV to process the CEL files from affymetrix 6 SNP.
When I run the first step "apt-probeset-genotype", it works for most of the cel files, but for some cel files, the program exited with a fatal error:
"FATAL ERROR:EmGenderCelListener::fillInContrastValues() - Warning. alleleMedian() failed for probeset: SNP_A-8311675"
Can someone help me to figure out this problem?
Thanks
When I run the first step "apt-probeset-genotype", it works for most of the cel files, but for some cel files, the program exited with a fatal error:
"FATAL ERROR:EmGenderCelListener::fillInContrastValues() - Warning. alleleMedian() failed for probeset: SNP_A-8311675"
Can someone help me to figure out this problem?
Thanks
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