It should be whole gene BED.
For more detail, please refer our updated documentation.
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help with DaPars
I'm trying to use the DaPars package (http://dldcc-web.brc.bcm.edu/lilab/z...ml/DaPars.html) and had a few questions.
First for the BED file, there are several options from UCSC for the BED record. Do I want the whole gene or just the 3’ UTR?
Second, I am confused what this option is: "-s Gene_Symbol_FILE, --gene_symbol_map=Gene_Symbol_FILE” and what I have to supply here?
Has anyone used this package or have any ideas?
Thanks
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