Problem running Velvetg

[JManuelMonroyKuhn]

Hello!
I'm trying to run Oases/Velvet but I got an error when running Velvetg, a library or something from a library is missing. I'm running everything on a cluster (it uses SLURM) and I do not have root permisons.
This is what I got

/home/hpc/uj502/di29kiz/velvet_1.2.10/velvetg: /usr/lib64/libgomp.so.1: version `GOMP_4.0' not found

I have to make Oases/Velvet run! Please help!
Thanks

[GenoMax]

Check the output of

$ ldd velvetg

Check if you have multiple versions of OMP library installed.

Then try the modification to LD_LIBRARY_PATH as suggested in this thread: https://gcc.gnu.org/bugzilla/show_bug.cgi?id=57123

[JManuelMonroyKuhn]

After ldd velvetg I got this

[email protected]:~/velvet_1.2.10> ldd velvetg
linux-vdso.so.1 => (0x00007fff069ff000)
libz.so.1 => /lib64/libz.so.1 (0x00007fd8d89d8000)
libm.so.6 => /lib64/libm.so.6 (0x00007fd8d875e000)
libgomp.so.1 => /lrz/sys/compilers/gcc/4.9.2/lib64/libgomp.so.1 (0x00007fd8d8547000)
libpthread.so.0 => /lib64/libpthread.so.0 (0x00007fd8d832a000)
libc.so.6 => /lib64/libc.so.6 (0x00007fd8d7fb0000)
librt.so.1 => /lib64/librt.so.1 (0x00007fd8d7da7000)
/lib64/ld-linux-x86-64.so.2 (0x00007fd8d8c25000)

which one is the good one?

[GenoMax]

Can you try adding this to your LD_LIBRARY_PATH (since your OMP library is not in /usr/lib64)?

/lrz/sys/compilers/gcc/4.9.2/lib64/libgomp.so.1

[JManuelMonroyKuhn]

Oh!!! Now I get it!
haha thanks
I will try that!