Whole genomes alignment

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georgeg9

Junior Member

Join Date: Jun 2013

Posts: 3
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Whole genomes alignment

12-10-2014, 02:28 PM

Which tool do you recommend for aligning large, but similar, vertebrates genomes? At the end i want to have a conservation track.
I tried lastz but I got a 500GB MAF file, which is really hard to process.

Any suggestions ?
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