ON a different note, and relating to Siva's other question, for HT-Seq, does the GFF have to have + or - for the strand?
I've been trying to figure out what is wrong with my gff
Code:
chr1 taeGut1_ensGene exon 8373168 8373328 . + . gene_id=ENSTGUT00000007148.3;Name=;Parent=ENSTGUT00000007148 chr1 taeGut1_ensGene exon 16249 16331 . + . gene_id=ENSTGUT00000007148.2;Name=;Parent=ENSTGUT00000007148 chr1 CufflinksGene exon 17859 18021 . . . gene_id=all.3.1;Name=;Parent=all.3
line 3 gets an error
Code:
Feature all.3.1 does not contain a 'gene_id' attribute
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