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I'm not aware of any free software that visualizes RNA-Seq counts - if you e.g. run the DESeq2 vst or rlog transform (http://www.bioconductor.org/packages....pdf#section.2) on the count tables, you could use good old MeV (http://www.tm4.org/mev.html)...Leave a comment:
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What is the best clustering/visualization tools for RSEM data points?
Hi, I am looking for simple tools to cluster/visualize transcriptomics data sets that are provided as a list of genes (contigs) with RSEM values assigned for each condition and put together as a table in the Excel spreadsheet. The laptop runs latest windows and doesn't have any bioinformatics packages installed.
I would appreciate any help,
Thanks
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The recent pandemic caused worldwide health, economic, and social disruptions with its reverberations still felt today. A key takeaway from this event is the need for accurate and accessible tools for detecting and tracking infectious diseases. Timely identification is essential for early intervention, managing outbreaks, and preventing their spread. This article reviews several valuable tools employed in the detection and surveillance of infectious diseases.
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Microbiome research has led to the discovery of important connections to human and environmental health. Sequencing has become a core investigational tool in microbiome research, a subject that we covered during a recent webinar. Our expert speakers shared a number of advancements including improved experimental workflows, research involving transmission dynamics, and invaluable analysis resources. This article recaps their informative presentations, offering insights...11-09-2023, 07:02 AM
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