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  • Select tagSNPs with Haploview

    Hi all!
    I need some help to select tagSNPs for a human gene. Could you please tell me if I will reach this goal with the following procedure?

    My first step is obtaining a list of SNPs for this gene. I found different lists for the same genes on Pubmed, Ensembl, GeneCards and UCSC Genome Browser.
    After that I want to somehow create an input file for Haploview out of the selected SNP list, for example with PLINK. Then I simply need to analyze the list with Tagger or create a LD plot.
    Is this an appropriate way to identify tagSNPs?

    Thank you very much!

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