hello,
I am looking for a mouse .gtf file based on refseq including model refseqs starting with XP, XM, XR_ .
refgene.gtf I found on UCSC does not include model refseqs.
Althoug mouse.1.rna.fna I found on ncbi includes model refseqs, it gives no information about their loci.
I am wondering if such a file is available or I have to make a .gtf by mapping the fasta file to genome, which I do not want to do.
Thanks
I am looking for a mouse .gtf file based on refseq including model refseqs starting with XP, XM, XR_ .
refgene.gtf I found on UCSC does not include model refseqs.
Althoug mouse.1.rna.fna I found on ncbi includes model refseqs, it gives no information about their loci.
I am wondering if such a file is available or I have to make a .gtf by mapping the fasta file to genome, which I do not want to do.
Thanks
Comment