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The GTF file will only have exon boundaries. You need to generate the Wig or BigWig or TDF files from the BAM files. You can then input those into IGV. -
Need a sugestion about Wiggle Plots Graph
Hi everybody, I have a own mitochondrial genome (a fasta and gff3), and i have a transcripts.gtf (output from Cufflinks), and I need make a pretty and simple Wiggle Plots Graph, tried UCSC but I cant find a way to use my genome on it, tried IGV without sucess too (I cant find option to make graphs), and the SeqMonk without sucess too.
I need a suggestion of a application or way to do it simple.
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Innovations in next-generation sequencing technologies and techniques are driving more precise and comprehensive exploration of complex biological systems. Current advancements include improved accessibility for long-read sequencing and significant progress in single-cell and 3D genomics. This article explores some of the most impactful developments in the field over the past year.
Long-Read Sequencing
Long-read sequencing has seen remarkable advancements,...12-02-2024, 01:49 PM
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