Thanks a lot for the advice. I agree that lacking biological replicates would not lead to meaningful p-values. I just checked the relative expression ratios, according to my collaborators' request, but did not perform any test.
May I ask you an un-relevant question: for a group of 10 co-expressed genes, may I use the average of the log2(RSEM+1) of these 10 genes to roughly represent the general expression profile? If so, it will be convenient to correlate this single average value to other features.
Thank you again!
Originally posted by lpachter
View Post
Leave a comment: