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  • clustering paired-end reads

    Hi Guys,

    Anybody can tell me which tools to use for paired-end reads clustering?
    In addition, I would like to do the clustering for 5 different datasets.

    I looked through UCLUST and CD-HIT, and none of them mentioned paired-end clustering, or multi dataset clistering.

  • #2
    According to which criterion do you want the grouping process to be executed ?

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    • #3
      it will be a simple identity match (97%).

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