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best bioinformatic methods for identification of miRNAs for differential expression

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  • best bioinformatic methods for identification of miRNAs for differential expression

    Hi everyone,

    I'm trying to find tools/pipelines in order to do the analysis of miRNAs from RNA-seq data, but I'm overwhelmed by the amount of software available to do this. Do you know which tools have a better performance or give overall good results?

    The data is from plasma samples and we want to assess the difference between samples coming from patients with a certain disease and controls.

    Thank you very much!
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