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  • #16
    Addition

    Hello James,

    We are a core facility with one GAIIx.

    DNA Core Facility
    University of Missouri
    216 Bond Life Sciences Center
    Columbia, MO 65211
    http://biotech.missouri.edu/dnacore/

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    • #17
      Please add Eureka Genomics as a site for Illumina GA II

      At Eureka Genomics we provide next generation sequencing services on an Illumina GA IIx as well as advanced bioinformatics analysis of next gen data using proprietary algorithms developed by our scientific founder, Dr. Yuriy Fofanov. We have worked for a variety of big pharma, biotech, government and academic researchers. Our next presentation is at the CHI Next Generation Sequencing Conference in Providence, RI on 9/23/09.

      In the US, we provide both sequencing and bioinformatics. In the rest of the world we partner with excellent local sequencing providors (e.g. Source Biosciences in the UK, GATC in Germany, Genotypic in India) who do the next gen sequencing and then we perform the bioinformatics analysis.

      Best regards,


      Michael Tippie
      VP, Business Development
      Eureka Genomics
      750 Alfred Nobel Dr.
      Hercules, CA 94547
      510-964-0461 (w)
      425-830-5805 (cell)
      www.eurekagenomics.com

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      • #18
        Baylor College of Medicine is mislabeled on your map. It's in Houston, TX, not Waco (we're unaffiliated with Baylor University). Here's a map of the correct location:

        http://maps.google.com/maps?f=q&sour...3&ie=UTF8&z=17

        Thanks, and nice work.
        Last edited by chrisamiller; 08-12-2009, 12:10 PM. Reason: typo

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        • #19
          Hi James and colleagues,

          Found this thread in my GenomeWeb feed. It's really a nice idea to see how this machines spread over the world. Do anyone know where I can find a Heliscope? By the way, I'm marking the next-gen seq center here in Brazil.

          LNCC - Laboratório Nacional de Computação Científica
          Av. Getulio Vargas, 333
          CEP 25651-075, Petrópolis, RJ - Brazil
          They have a 454.

          Instituto de Biologia
          Universidade Federal do Pará
          R. Augusto Corrêa, 1
          CEP 66075-110, Belém, PA - Brazil
          They have a SOLiD

          Centro Avançado de Tecnologias em Genômica
          Universidade de São Paulo
          Av. Prof. Lineu Prestes, 748
          CEP 05508-000 São Paulo, SP - Brazil
          They have a 454.

          There are more of them here, but by now I was unable to track them down.

          Best,
          Daniel
          Last edited by Jarretinha; 08-12-2009, 03:18 PM.

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          • #20
            Nice Work James, congratulation.

            Could you let us know the grand total number of instrument you have collected until now?

            I read recently this paper:
            http://www.genomeweb.com/leerink-rep...-poised-growth
            (the whole paper can be found here: http://siliconinvestor.advfn.com/rea...msgid=25756735)
            which mentions 900 instrument worldwide. Are we there yet?
            Last edited by DNAcowboy; 08-13-2009, 02:19 AM. Reason: provide full link

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            • #21
              addition

              There is one GAIIx at the University of Wisconsin - Madison

              University of Wisconsin Biotechnology Center Sequencing Facility
              425 Henry Mall, Madison, WI 53706

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              • #22
                further sequencing devices

                Hello James,

                There are further 2nd Generation Sequencing devices.

                machines:
                2x GAIIx
                1x GS FLX

                address:
                Fritz Lipmann Institute
                Leibniz Institute for Age Research
                Genome Analysis
                Beutenbergstr. 11
                07745 Jena
                Germany

                URL:
                http://genome.fli-leibniz.de

                Cheers,

                Marco
                Last edited by MarcoG; 09-04-2009, 01:39 PM.

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                • #23
                  Please edit information of Beijing Genomics Institute

                  Hi James,
                  It's a great work you've done to integrate the information of sequencing centers world wide.
                  For Beijing Genomics Institute in China, the headquater has moved to Shenzhen since May, 2007. We have 30 Illumina GAII, 1 ABI SOLiD, 1 Roche 454.

                  Beijing Genomics Institute at Shenzhen
                  Shenzhen, Guang Dong, China
                  www.genomics.org.cn

                  Thanks again for your effort.
                  Yang Zheng

                  Bioinformatics Center
                  Beijing Genomics Institue, Shenzhen

                  Website: www.genomics.org.cn

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                  • #24
                    Hi James, we have 1 GAII and 1 SOLiDv3. The Roche 454 was sent back!
                    Laurence

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                    • #25
                      Hello,

                      Great map!


                      We have 1 GAII at UUSM from UNAM, Mexico.
                      http://uusm.unam.mx/


                      It's new for us, so the website is not complete right now, but at least there is the contact info.
                      Greetings,
                      Leonardo
                      L. Collado Torres, Ph.D. student in Biostatistics.

                      Comment


                      • #26
                        2 GAIIs and 5 SOLiDs at TGen in Phoenix (www.tgen.org). Home of Craig et al, Nature Methods 2008 (bar-coded multiplexed sequencing).

                        445 N. 5th Street
                        Phoenix, AZ. 85004

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                        • #27
                          Just a detail about UUSM. It's located at Cuernavaca and not Mexico City.
                          Thanks for adding it

                          Leonardo
                          L. Collado Torres, Ph.D. student in Biostatistics.

                          Comment


                          • #28
                            Stanford heliscope

                            Stanford has a Heliscope in Steve Quake's department.

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                            • #29
                              Hi James,

                              We are a core facility with 1 GAII at MGX (3 GAII in november)
                              http://mgx.transcriptome.eu

                              Montpellier GenomiX (MGX)
                              Institut de Génomique Fonctionnelle
                              141 rue de la cardonille
                              34094 Montpellier Cedex

                              Cheers,

                              Christelle

                              Comment


                              • #30
                                Nope, the map does not allow this kind of info to be easily extracted. There are almost 150 sites listed as having next-gen sequencers. Most of these have multiple instruments and some have upwards of 40. I would guess the map captures around 400+ instruments, maybe more.

                                Keep on adding stuff everyone!

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