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ArthurD

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Join Date: May 2023

Posts: 1
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#1

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05-20-2023, 09:53 PM

Hello from Paris!
This forum was recommended to me as a good source of information.
I hope to learn from the community and possibly contribute some ideas as well in the future!
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seqadmin

Administrator

Join Date: Oct 2022

Posts: 109
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#2

05-22-2023, 05:53 AM

Hello ArthurD and welcome to the community. What types of sequencing or analysis are you performing in your lab?
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Differential Expression and Data Visualization: Recommended Tools for Next-Level Sequencing Analysis

by seqadmin

After covering QC and alignment tools in the first segment and variant analysis and genome assembly in the second segment, we’re wrapping up with a discussion about tools for differential gene expression analysis and data visualization. In this article, we include recommendations from the following experts: Dr. Mark Ziemann, Senior Lecturer in Biotechnology and Bioinformatics, Deakin University; Dr. Medhat Mahmoud Postdoctoral Research Fellow at Baylor College of Medicine;...
- Channel: Articles
05-23-2023, 12:26 PM
Variant Analysis and Genome Assembly: Recommended Tools for Next-Level Sequencing Analysis

by seqadmin

Continuing from our previous article, we share variant analysis and genome assembly tools recommended by our experts Dr. Medhat Mahmoud, Postdoctoral Research Fellow at Baylor College of Medicine, and Dr. Ming "Tommy" Tang, Director of Computational Biology at Immunitas and author of From Cell Line to Command Line.

Variant detection and analysis tools
Mahmoud classifies variant detection work into two main groups: short variants (<50...
- Channel: Articles
05-19-2023, 10:03 AM
QC, Alignment, and Mapping: Recommended Tools for Next-Level Sequencing Analysis

by seqadmin

With new tools and computational resources being released regularly, it can be hard to determine which are best suited for the analysis process and which older tools continue to be maintained. In an effort to assist the sequencing community, we interviewed three highly skilled bioinformaticians about their recommended tools for several important analysis applications.

Quality control and preprocessing tools
“Garbage in, garbage out” is a popular...
- Channel: Articles
05-16-2023, 10:11 AM

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Exploring French-Canadian Ancestry: Insights into Migration, Settlement Patterns, and Genetic Structure by seqadmin Started by seqadmin, 05-26-2023, 09:22 AM	0 responses 8 views 0 likes	Last Post by seqadmin 05-26-2023, 09:22 AM
Largest Catalog of Human Protein-Coding Variation Unveiled by seqadmin Started by seqadmin, 05-24-2023, 09:49 AM	0 responses 9 views 0 likes	Last Post by seqadmin 05-24-2023, 09:49 AM
Introducing ProtVar: A Web Tool for Contextualizing and Interpreting Human Missense Variation in Proteins by seqadmin Started by seqadmin, 05-23-2023, 07:14 AM	0 responses 28 views 0 likes	Last Post by seqadmin 05-23-2023, 07:14 AM
AMP Releases Recommendations for NGS Germline Variant Confirmation by seqadmin Started by seqadmin, 05-18-2023, 11:36 AM	0 responses 113 views 0 likes	Last Post by seqadmin 05-18-2023, 11:36 AM

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