Hello everyone!
This forum looks like a great place, I am very glad that I came across SEQanswers in an RNA-seq review (PMID:19015660)
I did a fair bit of microarray data analysis before (mostly with R Bioconductor), but looks like I will be shifting to RNA-seq data soon. I can use BWA/Bowtie to align reads to a genome and produce BAM/SAM alignment files, but what is a good place where I can begin to learn how to take it from there? I am particularly interested in comparing abundances of transcripts between samples/treatments...
thanks!
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Bon jorno.
Last edited by history_of_robots; 05-30-2011, 12:04 PM.
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