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  • lara
    started a topic coverage for amplicon seq?

    coverage for amplicon seq?

    Hi SEQcommunity,

    we're starting a 454 project to look for mutations/SNPs in several amplicons of a particular gene. We're not sure about the coverage needed. Roche told us we need a covergae of 1000 to detect a variant with 5% frequency. Does anyone got experience with this issue?

    Thanks in advance

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  • seqadmin
    Advanced Methods for the Detection of Infectious Disease
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    The recent pandemic caused worldwide health, economic, and social disruptions with its reverberations still felt today. A key takeaway from this event is the need for accurate and accessible tools for detecting and tracking infectious diseases. Timely identification is essential for early intervention, managing outbreaks, and preventing their spread. This article reviews several valuable tools employed in the detection and surveillance of infectious diseases.
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    Yesterday, 01:15 PM
  • seqadmin
    Strategies for Investigating the Microbiome
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    Microbiome research has led to the discovery of important connections to human and environmental health. Sequencing has become a core investigational tool in microbiome research, a subject that we covered during a recent webinar. Our expert speakers shared a number of advancements including improved experimental workflows, research involving transmission dynamics, and invaluable analysis resources. This article recaps their informative presentations, offering insights...
    11-09-2023, 07:02 AM

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