galaxy ++
And, plans like these make it sound even more attractive...
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You may want to check out Sample Tracking in Galaxy. It is web based open source basic LIMS integrated with Galaxy.Leave a comment:
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We (Huntsman Cancer Institute) just published a paper describing a Genomic LIMS and Analysis Project Center called GNomEx. It's free/ open source, supports microarray and next gen sequencing workflows and dovetails with our programmatic genomic data distribution server (GenoPub) for pushing data to DAS/2 enabled client applications such as the Integrated Genome Browser. See http://www.biomedcentral.com/1471-2105/11/455 , http://sourceforge.net/projects/gnomex/ , and a play demo server at http://diserafed.hci.utah.edu/ .Leave a comment:
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LIMS for Next gen sequencing
Currently we have a custom LIMS that require some updates. We are considering if we should make these changes or purchase a commercial LIMS. As for commercial LIMS we have been looking at the ones from Genologics and Geospiza. Are there others we should consider?
Can you please give some feedback on the next generation sequencing LIMS that you have at your center? If you can briefly explain why you decided on that particular LIMS, advantages and disadvantages etc I would really appreciate.
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The recent pandemic caused worldwide health, economic, and social disruptions with its reverberations still felt today. A key takeaway from this event is the need for accurate and accessible tools for detecting and tracking infectious diseases. Timely identification is essential for early intervention, managing outbreaks, and preventing their spread. This article reviews several valuable tools employed in the detection and surveillance of infectious diseases.
...11-27-2023, 01:15 PM -
Microbiome research has led to the discovery of important connections to human and environmental health. Sequencing has become a core investigational tool in microbiome research, a subject that we covered during a recent webinar. Our expert speakers shared a number of advancements including improved experimental workflows, research involving transmission dynamics, and invaluable analysis resources. This article recaps their informative presentations, offering insights...11-09-2023, 07:02 AM
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