Seqanswers Leaderboard Ad

Collapse

Announcement

Collapse
No announcement yet.
X
 
  • Filter
  • Time
  • Show
Clear All
new posts

  • Webinar on 31 Mar-Integrated Analysis using Metadata Framework & Correlation Analysis

    Live webinar on Integrated Analysis using Metadata Framework and Correlation Analysis in GeneSpring 13 - Glioblastoma case study

    Presented by Agilent Technologies and Strand Life Sciences

    Abstract
    Agilent Technologies GeneSpring® offers an intuitive and interactive environment for integrated analysis of transcriptomics, metabolomics, proteomics and NGS data within a biological context. This ability is now further enhanced by introduction of metadata framework and correlation analysis in GeneSpring 13.

    Metadata analysis framework allows researchers to visualize the abundance profiles of samples alongside metadata such as clinical, physiological, or technology related information. Ideal for large datasets, metadata framework enables users to reveal tacit dependencies between characteristics of the subjects or samples and their gene, metabolite, or protein expression profiles. Correlation, on the other hand, is a statistical technique and measures the strength and directionality of linear relationship between two quantitative variables.

    In this webinar, using the expression values, copy number and associated metadata for 173 Glioblastoma Multiforme (GBM) samples from TCGA, we will highlight and demonstrate the metadata framework and correlation functionality of GeneSpring. Specifically, we will focus on:
    • Identification of molecular subtypes in tumor samples using clustering and correlation analysis
    • Relationship between molecular subtypes and copy number aberrations using metadata analysis framework
    • Correlation analysis between mRNA and micro-RNA expression

    Speakers:
    Dr. Durairaj Renu, Senior Applications Scientist, Strand Life Sciences
    Dr. Carolina Livi, Bioinformatics Segment Manager, Agilent Technologies

    Date and sessions
    Session 1: Mar 31, 2015; SAPK/APFO; 9 PM PDT
    Session 2: Apr 1, 2015; EMEA; 7 AM PDT
    Session 3: Apr 2, 2015; AFO; 9 AM PDT

    Register at: http://www.strand-ngs.com/webinar_registration

Latest Articles

Collapse

  • seqadmin
    Strategies for Sequencing Challenging Samples
    by seqadmin


    Despite advancements in sequencing platforms and related sample preparation technologies, certain sample types continue to present significant challenges that can compromise sequencing results. Pedro Echave, Senior Manager of the Global Business Segment at Revvity, explained that the success of a sequencing experiment ultimately depends on the amount and integrity of the nucleic acid template (RNA or DNA) obtained from a sample. “The better the quality of the nucleic acid isolated...
    03-22-2024, 06:39 AM
  • seqadmin
    Techniques and Challenges in Conservation Genomics
    by seqadmin



    The field of conservation genomics centers on applying genomics technologies in support of conservation efforts and the preservation of biodiversity. This article features interviews with two researchers who showcase their innovative work and highlight the current state and future of conservation genomics.

    Avian Conservation
    Matthew DeSaix, a recent doctoral graduate from Kristen Ruegg’s lab at The University of Colorado, shared that most of his research...
    03-08-2024, 10:41 AM

ad_right_rmr

Collapse

News

Collapse

Topics Statistics Last Post
Started by seqadmin, Yesterday, 06:37 PM
0 responses
10 views
0 likes
Last Post seqadmin  
Started by seqadmin, Yesterday, 06:07 PM
0 responses
9 views
0 likes
Last Post seqadmin  
Started by seqadmin, 03-22-2024, 10:03 AM
0 responses
51 views
0 likes
Last Post seqadmin  
Started by seqadmin, 03-21-2024, 07:32 AM
0 responses
67 views
0 likes
Last Post seqadmin  
Working...
X