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  • dan
    replied
    Hi AniS, I suspect you've posted in the wrong forum, but... You could try asking your question in an email to the contact address for DESeq listed here:
    http://seqanswers.com/wiki/DESeq

    Leave a comment:


  • AniS
    started a topic DeSeq PlotPCA

    DeSeq PlotPCA

    Hi Fellow DeSeq users,

    I have used DeSeq for a few of my expression analyses and was trying to plot a PCA graph (for sample clustering) with the same.

    Here is the command i used:


    print(plotPCA(vsdFull))

    I am getting the following error:

    Please give the x-coordinate for a legend.plotPCA
    Please give the y-coordinate for a legend.

    Has anyone seen this before? Please let me know as I am not that proficient with the package yet and would appreciate any input from you.

    Thanks in advance
    AniS
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