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Masklin

Junior Member

"Astrophysicist turned bioinformatician currently working with clinical neurogenetics, hoping to one day work with longevity."

Last Activity: 09-19-2023, 05:47 AM

Joined: 10-19-2022

Visitor message from Shina

Shina posted a Visitor Message for Masklin

11-01-2022, 04:32 AM
Masklin https://genome.ucsc.edu/cgi-bin/hgTr...Q2Kv5YO90QQ2om

Does this link work to identify SNPs in apoL1? if so please provide me with a step by step answer that will be great. I do not have any data to work with as I am identifying so how will I use this to do a ppt presentation?
Masklin commented

11-01-2022, 06:53 AM
Are you simply going to talk generally about SNPs in APOL1? I haven't really considered this "problem" before, but yes you can see all the known SNPs in APOL1 using that browser. You can choose what tracks to include. Try this link:

Human hg38 chr7:155,799,529-155,812,871 UCSC Genome Browser v463

https://genome.ucsc.edu/cgi-bin/hgTracks?db=hg38&lastVirtModeType=default&lastVirtModeExtraState=&virtModeType=default&virtMode=0&nonVirtPosition=&position=chr22%3A36265702%2D36265823&hgsid=1487615183_5jsNfCCalcc1SUQ2Kv5YO90QQ2om

The bottom track is SNPs. You can scroll to the right and left to see more in other exons of APOL1.
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