Hello !
I am doing genome sequence alignment using MUMmer, in particular I want to do a dotplot with mummerplot. So the passages that I...
16 results in 0.0029 seconds.
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What is the file .mums created by mummer ?
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Webinar: Perform large NGS assembly and analysis on any computer
Join DNASTAR Senior Product Manager Matthew Keyser to learn how to quickly assemble large NGS data sets using a simple laptop or desktop computer, including... -
Comparing two genome sequences
I am learning how to compare two genome sequences to find how similar they are i did not find any resource related to it.
Now say if i... -
Webinar: RNA-Seq with Enhanced Isoform Analysis
RNA-Seq with Enhanced Isoform Analysis
Presented by: Matthew Keyser
April 5, 2017 at 12:00 pm EDT
Our popular RNA-Seq workflow... -
Webinar 6/22: Speed, Accuracy and Capacity for Your NGS Analysis Projects
Join us for a webinar tomorrow, June 22 at 12 pm EDT/9 am PDT.
DNASTAR NGS Senior Applications Manager, Matt Keyser and VP of Sales, Dr.... -
pbl to run hisat2 on a computer cluster with hg19
Hi,
I want to map RNAseq data (from 10 to 30 Go, single and paired-end) on complete human genome with hisat2. To do that, I use a cluster (15 nodes,... -
Bowtie alignments and --local function
I've just starting sequencing using MiSeq and am stumbling a bit in the analysis of my output reads, specifically using bowtie2 to align the reads to... -
genome aligner output in sam format
Hi,
might be an easy question but can all genome aligners output the aligned reads in the SAM format? If not, any converter that can convert to... -
Progressive Mauve error
Hi all,
I'm trying to run progressive mauve on three Drosophila genomes with the following command,
/data/programs/mauve_2.4.0/linux-x64/progressiveMauve... -
Hadoop for human genome data
Hello Everyone,
How do we store the human genome data using Hadoop (chromosome level) so that we can perform processing (bio-algorithm... -
SV reads in whole genome
I'm looking at reads from genomes that definitely include structural variation (based on Breakdancer and SVDetect) and I'm running into something that...Last edited by saraki; 08-31-2014, 08:19 AM. -
exosome rna-seq - poor genome aignment
I have exosome rna-seq data with ~13M reads. The data is 50bp single-end from HiSeq 2000 machine. Nugen ovation kit v2 was used for library preparation... -
DNASTAR Webinar on Gap Closure in Genomic Assemblies
Join us for a webinar on Wednesday, January 30, 2013 at 12:00 pm EST (GMT -5:00). Next-gen application scientist, Matt Keyser will show you how to close... -
Webinar: Automated Bacterial Genome Closure in Lasergene Genomics Suite
DNASTAR is holding an automated bacterial genome closure webinar on December 5, 2012 at 12:00 pm EST (GMT -5:00). Please join us for a live demonstration...
