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Cole Trapnell
Senior Member
Last Activity: 04-15-2014, 10:25 AM
Joined: 11-05-2008
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Cufflinks: transcript assembly and abundance estimation for RNA-seq (Topic in the Bioinformatics forum)
02-10-2011, 12:46 PM
DEG for paired samples, biological replicates (Topic in the RNA Sequencing forum)
05-07-2014, 01:25 AM
DEGseq or edgeR (Topic in the Bioinformatics forum)
02-12-2010, 03:13 PM
Differential expression, splicing, and promoter use with Cufflinks (Topic in the Bioinformatics forum)
09-24-2015, 03:03 PM
Differential gene expression: Can Cufflinks/Cuffcompare handle biological replicates? (Topic in the Bioinformatics forum)
12-14-2010, 04:57 PM
Gene information in Cuffdiff output files (Topic in the Bioinformatics forum)
10-05-2010, 05:13 AM
Have you tried cufflinks 0.9.0 beta ? (Topic in the Bioinformatics forum)
10-04-2010, 08:37 AM
help on Cufflinks output: individual exon have same FPKM (Topic in the Bioinformatics forum)
05-03-2010, 09:38 AM
How do I get one FPKM value per gene? (Topic in the Bioinformatics forum)
07-13-2016, 11:54 PM
How to combine junctions.bed files produced by TopHat (Topic in the Bioinformatics forum)
05-03-2015, 02:33 AM
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