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dpryan

Devon Ryan

Last Activity: 11-22-2021, 10:11 AM

Joined: 07-28-2011

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Last Activity

TopHat with and without GTF (Topic in the Bioinformatics forum)

02-06-2014, 06:27 AM

Tophat-accepted_hits.bam file shows more read with samtools flagstat (Topic in the RNA Sequencing forum)

09-22-2015, 10:37 AM

Tophat-Cufflinks-Cuffdiff: different libraries used as replicates (Topic in the Bioinformatics forum)

01-13-2014, 08:40 AM

tophat/bowtie find no alignment on long (> 250 bp) reads (Topic in the Bioinformatics forum)

01-05-2015, 10:46 AM

Tophat/Bowtie not using gene symbols from gtf file (Topic in the Bioinformatics forum)

05-13-2013, 10:39 AM

Tophat/cufflinks with multiple fastq files? (Topic in the Bioinformatics forum)

11-24-2014, 05:16 PM

Tophat2 Alignment Rate (Topic in the Bioinformatics forum)

11-21-2012, 02:05 AM

Tophat2 bowtie location (Topic in the Bioinformatics forum)

02-12-2014, 09:20 AM

tophat2 bowtie option help (Topic in the Bioinformatics forum)

11-26-2013, 04:24 AM

Tophat2 can't find Bowtie index files *.ebwt (Topic in the Bioinformatics forum)

12-20-2015, 09:06 PM

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