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How to visualize mapped RNAseqs and annotations?
I have a bunch of supercontigs with RNAseqs mapped to them in an ace file. In a gtf file I have the annotations for these supercontigs. How can I display...
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gsMapper failed to create ace or bam file
Hi,
I encountered a problem with gsMapper (v2.6) when I tried to align 10M Illumina paired end reads on to 100 large contigs. Even though...
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Generating multi-species alignments from GTF
Hiya folks,
I've got a two part question for you today. I'm attempting to create multi-species alignments for use in a scan for selection....
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Rarefaction/saturation curve based on NGS data
Hi all,
most likely a simple question, but I'm looking for a tool (software, python/Perl/R script) that produces a rarefaction curve base...
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How do I convert 454 ace to a regular ace?
I have read on the BioPerl site that a 454 ace is not standardized due to its coordinate system. How can I convert it to the standard ace file?
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Genotypic Technology becomes first Genomics company to be adjudged best run business
Its not everyday that a decade old company in a relatively new area of business gets accolades to be a best run business. We at Genotypic Technology are...
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CAP3 output *.ace in EagleView?
Hello,
I am a molecular biologist. We have done some EST sequencing and I used TGICL / CAP3 for sequence assembly. Everything works fine and it...