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Plotting distribution of allelic frequency under different coverage values
I'm new to bioinformatics, and have an incomprehensible PI. Could someone clue me in on some of what is going on in the prompt below? For instance:...Last edited by toots; 10-22-2012, 08:36 AM. -
Allele-specific expression from samtools mpileup data
Hi all,
I am using paired-end RNAseq data to investigate allele-specific expression (ASE) in a human population. I mapped the 37bp reads... -
Strange Ti/Tv ratios in GATK VariantEval report
Hello everyone,
I experienced quite strange Ti/Tv ratios in my GATK VariantEval report (I cut out some columns to make it fit better in here):...
