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Jfly7 started a topic How to get allele frequency histogram from vcf file?

in Bioinformatics

12-15-2014, 06:54 PM
How to get allele frequency histogram from vcf file?

Hi Everyone,

I am new to SEQanswers and the bioinformatics world, and I am looking for some help. I would like to get a count of allele...

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nans_bn started a topic het:hom distribution in case-control study

in Bioinformatics

11-25-2013, 06:40 AM
het:hom distribution in case-control study

Hello,
I am working on case-control study and would like to understand how to calculate and interpret the hom/het ratio distribution of the minor...

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Last edited by nans_bn; 11-26-2013, 02:24 AM.
saran.ela123 started a topic Tools for analysis allele specific expression in RNA-Seq data?

in Bioinformatics

10-09-2013, 06:54 PM
Tools for analysis allele specific expression in RNA-Seq data?

Hi all !!!

I am working on arabidopsis thaliana rna seq data. i need to analysis allele specific expression of it. can any body help me...

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krawitz started a topic A heretically simple approach to variant calling

in Bioinformatics

12-21-2011, 12:16 AM
A heretically simple approach to variant calling

Hi everyone,

we had a look at the distribution of heterozygous allele frequencies in NGS datasets and found that their variance is larger...

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