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dena.dinesh started a topic Interpreting the CIGAR and Read Sequence in sam/bam

in Bioinformatics

05-29-2015, 01:22 AM
Interpreting the CIGAR and Read Sequence in sam/bam

Hi,

I ran bowtie2 to align the fastq reads to align against a de novo assembled transcriptome. I ran the following command.
...

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vincent lee started a topic same reads with different CIGAR

in Bioinformatics

10-09-2012, 06:08 PM
same reads with different CIGAR

Hi all,
I am using bwa(Version: 0.6.2-r126, default parameter) for reads alignment, and convert the result into bam format.
But I find some...

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