Hi,
I am attempting to use BiSeq (Hebestreit et al. 2013) to delineate DMRs among treatment groups in Bismark aligned RRBS data
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BiSeq - How to handle covariates?
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Binary methylation states after bisulfite sequencing
Hi everyone. I have sequencing data (illumina Hiseq) from bisulfite treated samples (Arabidopsis). The bisulfite conversion of some selected regions was... -
Some Covered CpG sites is extremely high for RRBS with BiSeq package
I am using BiSeq package following bismark tools for RRBS analysis. I termed Covfiles as a BSraw file to include all the used 20 samples, and below is...
