Hi,
I ran bowtie2 to align the fastq reads to align against a de novo assembled transcriptome. I ran the following command.
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3 results in 0.0021 seconds.
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Interpreting the CIGAR and Read Sequence in sam/bam
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need help to solve bowtie2-inspect error
Dear all bowtie users,
I am new in NG-sequencing. I used following command to build index of repeat masked genome by repeatmasker.... -
Bowtie2 output options
Hi guys,
I have been trying to write unaligned (--un path) and aligned (--al path) reads from a Bowtie2 (Bowtie2 2.0.0-beta7) alignment...
