3 results in 0.0030 seconds.
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bash loop to count multiple words from multiple corresponding files
I have generated multiple read mapping files (.sam) generated with bowtie2 "--no-unal" parameter. As the number of files are huge (7 reference... -
views Bowtie2 : aligned result read count not matching with sam Read count
bowtie2 -f -N 1 -p 8 -x REF.fa -1 sample01_1.fasta -2 sample01_2.fasta -S sample01.sam --al sample01_al.fasta --al-conc sample01_alcon.fasta
...Last edited by vinumanikandan; 05-13-2015, 03:05 AM. -
different results in samtools flagstat and bowtie
Hi,
I'm mapping human single-end miRNA reads to the genome using bowtie -v0 -k5
The reads are in fasta format and collapsed with...
