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linjc started a topic no difference when using N=0 and N=1 on bowtie2 2.2.6

in Bioinformatics

04-13-2017, 06:41 AM
no difference when using N=0 and N=1 on bowtie2 2.2.6

Hi.
When I used bowtie2 2.2.6 on Ubuntu 16.04 LTS for mapping arabidopsis reads. The mapping rates have no difference when I set N=0 or N=1....

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mavadhani started a topic Python script for bowtie2 alignment

in General

11-10-2016, 09:59 AM
Python script for bowtie2 alignment

Hello All!

I am new to coding and am trying to write a python script to analyze a bunch of fastq files from RNASeq analysis. I am using...

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