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MACS2 broad peak calling
Is there an explanation for what the broad-cutoff means for broad peak calling for MACS. In the documentation for MACS they say it is a q-value cutoff... -
MACS2 ChIP-SEQ ANALYSIS WITH BIOLOGICAL REPLICATES
I am having problems with the broad mark H3K27me3, my biological replicates and identifying differential enrichment between treatment groups
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