Hi there,
I am a new learner of bioinformatics.
I used Trinity to do de novo transcriptome assembly then imported the assembly.fasta...
11 results in 0.0039 seconds.
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How to extract nucleotide sequeces from tblastx table
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Where do you put path.properties for CLC workbench on Mac OSX
I have CLC Genomics Workbench running on Mac OSX Yosemite. I need to specify a tmp directory on my raid, but cannot seem to find the correct location... -
BLASTn virus with CLC
Hello
I am a newcomer to bioinformatics, and need your assistance.
I bought CLC Genomics Workbench, and started with... -
How to set the distance of paired reads for de novo assembly?
Hi everyone,
I am using CLC bio to do the de novo assembly of bacterial genomes. I found that changing the setting of distance of paired... -
Quality of Assembly based on Ion Torrent Data (microbial genome)
Hi All !
After some good exercise with data, I obtained following results as follows: Ion-Torrent Data for a 5 Mbp microbial genome: Acquired... -
Comparing the quality of de novo assembly from two runs' data
We are using Miseq to sequence microbial genomes (~5Mb). In the first run (1#), library containing 12 samples were sequenced, and 6 samples were sequenced... -
CLC-Genomics - Version 6 apparently runs slower than V5
Dear All, for some strange reasons, in our lab, we find CLC's latest version 6 runs slower than v5 for the same parameter of Reference based mapping.... -
clc exporting mapped reads
After mapping some Illumina short-reads back to a reference, I want to be able to export the reads that were successfully mapped for use in mapping to... -
Getting a full annotation onto a consensus sequence in CLC Genomics Workbench
Hi all,
I'm having a little problem with my analysis using CLC tools. I am trying to assemble illumina reads from clinical isolates of P.... -
Which assembly algorithms to benchmark?
Hi everyone,
We're relatively soon going to do some in-house benchmarking of our own algorithms which will be published in a white paper.... -
Hello from Aarhus, Denmark
Hi everyone!
I'm Lasse Goerlitz from Aarhus in Denmark. I work as Head of Global PR & Marketing at CLC bio - and I promise I won't...
