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lre1234 started a topic running haplotypcaller in small buckets

in Bioinformatics

11-12-2014, 01:11 PM
running haplotypcaller in small buckets

Hi all,

I am going to be running the haplotypecaller on some bunch genomes. My estimates are that each sample will take around 24hrs to...

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lre1234 started a topic splitting haplotyepecaller onto multiple threads

in Bioinformatics

10-22-2014, 04:43 AM
splitting haplotyepecaller onto multiple threads

Hi all,

Quick question, I am doing some whole genome and am using the GATK haplotypecaller. To speed things up, I would like to break the...

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