Hi,
I performed a detailed time-course mRNA-seq experiment without any sequencing replicates (the input RNA, however, was a pool of equal...
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Cuffnorm's FPKM - advisable to perform TPM conversion?
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Cufflinks problem
Hello,
I tried to get gene expression level bby using tophat/cufflinks pipeline. I follow the step exactly like the flowchart in this link:...
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cuffnorm_XS_attribute_Error
Hello,
I have single end RNA-seq data downloaded from SRA. This RNAseq data lacks XS tag. I manually inserted XS tag by bamutils tool....Last edited by woker; 06-03-2014, 05:48 AM.
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Wierd issue with Cufflinks 2.2.0
Hi all,
I'm having issues with results from cuffnorm.
I had 4samples(R1-R4) with 3replicates each, so that's 12 PE fastqs
...