Hi there,
I have been using GATK to identify variants recently. I saw that BQSR is highly recommended. But I don’t whether it is still needed...
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Is BQSR necessary for de novo mutation calling?
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Publicly available exome data
Hi,
I'm after some publicly available exome data from a trio in which there is a known de novo mutation. I'd like to run it through my...
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FamSeq vs Polymutt vs DeNovoGear
Hi,
I would like to call variants jointly in a trio, taking pedigree info into account. I have heard of three tools for doing this - FamSeq...